this Crane Cams tutorial about 1/2 way down the page.
http://www.cranecams.com/?show=faq&id=3
Assuming you have non-adjustable rockers, making the two marks will tell you if the lifters are o.k. or collapsed (if collapsed, the push rod will not rise after taking the rocker shaft off).
I'm not convinced, in a new engine, that this is source of the bent pushrod. Short of taking the heads off to check for valve-piston or valve to cylinder wall clearance...
-pull all the plugs and both rocker shafts. Btw, you could mark a few pushrods before doing so (per Crane's example) and a few minutes later see if they 'rise'. Then, turn the motor over by hand (no starter!) and see if it completes 2 full turns. Reason why is to see if any nuts, bolts, etc. may have made their way into the intake manifold and down into the chambers.
-if all that looks good, I'd next yank the intake (didn't say this would be easy!) and heads and start inspecting the piston tops, chambers and cylinder wall for interference.
-then, follow the CC article on how to check for sufficient v-p clearance.
http://www.carcraft.com/howto/116_0701_valve_to_piston_clearance/index.html
If you elect not to go this far, do not attempt to start the engine or use the starter to spin it over! More damage could be done until the source of the problem is identified!